If you’ve been following my microgreen farm journey, you know I’m a fan of small-scale growing. This guide shows you how to grow stunning and nutrient-rich amaranth microgreens in personal-sized containers you probably already have, using minimal space and time. Yes, you can grow your own nutrient-packed microgreens all year round!

Image of 6 Red Garnet Amaranth Microgreens
Look at that color! Micro Red Garnet Amaranth is seriously vivid

This guide will cover everything from the essentials like coco coir, amaranth seeds, the mister I use and love, and growing containers. With just a few minutes of daily care, you’ll be harvesting your own delicious microgreens in no time. Read my other grow guides about growing micro broccoli, micro kale, micro arugula, and sunflower shoots to have a variety of different microgreens at a time.

Farmer's Market Display of Living Trays of Microgreens
My farmer’s market booth selling a variety of living microgreens trays.

What is Amaranth?

Amaranth is a highly nutritious grain that has been cultivated for thousands of years. The ancient Aztec civilization relied heavily on amaranth and even used it in their religious ceremonies. It’s often referred to as a “pseudo-cereal” because it’s not technically a grain, but it’s used similarly in cooking and shares many nutritional benefits with grains.

There are many species of amaranth, most are edible, but please don’t go foraging for amaranth unless you are very knowledgeable about wild plants.

The most popular edible variety of amaranth for growing microgreens is Red Garnet Amaranth. Read much more about Red Garnet Amaranth Microgreens in this future post. Green amaranth is also grown as a microgreen but lacks the bright red color.

Why Should You Trust My At-Home Amaranth Microgreens Growing Method?

I’m a seasoned (former) microgreen farmer with over seven years of experience. I believed in the “living tray” method of selling microgreens; most of the microgreens I sold came in 8oz round deli trays and still living, so the eater could harvest their own microgreens right before consuming. That means I grew thousands of small, personal-sized microgreen trays. All my experience is synthesized in this guide to help individuals grow their own microgreens.

This guide isn’t about industrial-scale production; it’s designed for home cooks seeking fresh, flavorful microgreens for personal consumption. Discover the diverse varieties I’ve successfully grown and sold for years and learn the exact methods I used to provide my farmer’s market customers with the highest-quality microgreens.

Sign suggesting ways to eat microgreens displayed in our farmers market booth
One of the signs we displayed in our farmers market booth suggesting ways to use microgreens

What Are Amaranth Microgreens?

Microgreens are edible immature plants with loads of flavor and packed with nutrients. Amaranth Microgreens are very young and immature amaranth plants. The same seed for growing fully mature plants is used to grow microgreens.

How Long Does It Take To Grow Amaranth Microgreens?

Micro Amaranth has a longer growing time than arugula but shorter than cilantro. Somewhere between 8 and 14 days. If the weather is warm (70- 100 degrees) Amaranth Microgreens should be ready in about 8 days. If the weather is cold (55-65ish degrees) closer to two weeks. If the weather is even colder, you’ll need to grow them indoors and use a grow light (1.5 weeks if using lights and a heated mat, or 2.5 weeks if just using a grow light). Amaranth is difficult to grow in cold weather. It is best to grow it indoors where the temperature is warmer and consistent.

What Is the Difficulty Level for Growing Amaranth?

Intermediate. Micro Amaranth is not a beginner microgreen variety. The microgreens are very tender and take longer to grow. Every microgreen that takes longer to grow is more prone to mold or other types of bacterial attack.

Micro Amaranth is also temperamental about water. Too much water or too little water and micro amaranth suffers. The roots are small and less robust than other hardy microgreens like radish, broccoli, and kale.

Should you encounter mold, don’t stress out. Yes, you will have to start over, usually a microgreen tray will not thrive with funky mold. Before you trash the entire tray, ensure the funky white stuff on your grow isn’t just root hairs.

Root hairs are completely normal and can look like mold

Read more about how to determine if the funky white stuff in your microgreens tray is mold or root hair. It is much harder to see the root hairs of micro amaranth compared to other microgreens. The image below shows root hairs on the larger, more robust broccoli microgreens. Because the roots on micro amaranth are so delicate, it will not be easy to see root hairs on micro amaranth.

If you see white fuzz when the seeds are just starting to germinate, it is probably root hairs. If you see grey flecks in the white fuzz, you might have a mold or fungus. With more experience growing micro amaranth, you’ll begin to understand when something funky and unwelcome is growing in the tray with the microgreens.

Broccoli Microgreens seeds just germitated with root hairs showing
Check out the healthy root hairs on these Broccoli Microgreens! Root hairs are NOT mold.

Gather Your Microgreens Growing Supplies

1. Microgreens Seeds

To minimize the risk of foodborne illness, always purchase amaranth microgreen seeds or sprouting seeds from a reputable seed supplier that guarantees their suitability for microgreen production. Refer to my previous post for a detailed explanation of the difference between Sprouts and Microgreens.

For a small 8-ounce deli tray, approximately 1/2 teaspoon of seeds is ideal. I’ve personally had positive experiences with these red garnet amaranth seeds. Sprouting and microgreens seeds can be used interchangeably).

Keep in mind, contaminated seeds can lead to illness outbreaks, especially in sprouts. By choosing reputable seed vendors and following safe growing practices, you can ensure the safety and quality of your microgreen harvest. Always look for seed companies that advertise “microgreens” or “sprouting” seeds. Also, look for companies that test their seeds for contaminants.

Cup of red garnet amaranth microgreens seeds
Cup of Red Garnet Amaranth Seeds

2. Growing Trays

For home growing, I recommend using transparent 8-ounce round deli containers. The visibility allows for easy monitoring of root health and growth progress. The 8-ounce size is convenient for individual consumption and allows you to experiment with various microgreen varieties, each in its own container. These trays are easy to clean and dishwasher-safe, ensuring long-term use. The round shape promotes even airflow, minimizing the risk of mold and ensuring a healthy crop.

You can buy 8-ounce deli trays in bulk on Amazon which are great if you will be growing many varieties at once, or you are growing microgreens with a group of people (or doing a classroom hands-on growing lesson).

Coco Coir in 8-ounce deli containers

Can I Repurpose a Used Container? Does it Have to Be 8oz?

You can repurpose a food container, like a dip or hummus container. You may have to adjust the amount of growing medium and seeds.

They don’t exactly need to be 8-ounce or round for that matter. But, 8-ounce is a very good size for individual consumption. It allows you to grow multiple varieties at once, each in its own tray. They are easily washable and fit in a standard dishwasher and they are readily available. Also, the round tray allows for even air distribution and airflow to minimize crop loss from mold.

Deli trays washed and drying.
8oz deli trays are reusable. This is a picture of the trays that customers returned for reuse.

3. Mister

A spray bottle with a fine mister and clean water, the kind you’d drink. If you are going to grow regularly, a pump garden sprayer is convenient. However, a small spray bottle or even the mister nozzle on your garden hose will work in a pinch.

2L mister bottle with micro arugula
A large pump mister bottle like this one is highly recommended for misting microgreens

4. Growing Medium (“Soil”)

I recommend Coco Coir to grow amaranth. Don’t waste your time trying to grow on a paper towel (future post on that). Growing mats are an option too. I don’t prefer growing mats because they can break easily and need more attention with watering (they dry out faster).

Coco Coir can come compressed or already fluffed up. Compressed bricks are much easier to store and are more economical to purchase online. The most cost-effective is the 5kg size here (you can either rehydrate the entire brick, or chip off pieces as you go), or get the smaller compressed brick here, or buy even small pucks here (I use two of the 30 mm pucks per tray).

Read more about why I don’t grow in peat moss here.

8-ounce deli tray, coco coir, a cup with a flat bottom, and a mister

A Warning About Growing Medium and Food Safety

There are several companies that sell microgreen-specific growing mediums. Be alert. Any medium used to grow microgreens should absolutely not contain any animal-based manure. That includes earthworm castings and guano. Avoid any growing medium or microgreen soil that contains any animal by-products. If the soil says it has compost– that too may contain animal by-products.

Why? Animal manure is known to contain various pathogens like e-coli and salmonella, which can make you sick. Because microgreens are consumed shortly after planting, it is very possible your microgreens can become contaminated too. 

5. Topper

After sowing, your tray of microgreens will need a cover until they grow a stem. The cover minimizes evaporation, keeps the seeds from drying out, and provides a darker environment.

You have two options: a small piece of cardboard or box to place on top of your tray, or a second tray placed directly on top of your seeds. With the cardboard, you will have to spritz your seeds twice a day, with the second tray on top, you can plant and ignore for several days.

A small container with an inch of soil, seeds, and another small clear container on top. Microgreens freshly sown and covered.
Arugula seeds freshly sown, misted, and topped with a second clean tray.

6. Sun or Grow Light

If you’ve got a sunny window or a place with indirect sunlight, that is all you need. If it is mid-winter, cold and there is little sun out, you’ll need a grow light or even a desk lamp.  Read to the bottom to see my note on growing in colder conditions.

7. Measuring Cup and Teaspoons

You’ll need a ½ cup measuring cup and 1 teaspoon.

8. Water

Microgreens must be grown in potable water (i.e. water that is not contaminated and is safe to drink straight). Use bottled water, or filtered (we like this countertop Berkey filter system and this under-sink reverse osmosis filter), and boiled water (if you must.) Avoid distilled water.

How To Grow Amaranth Microgreens in Soil

Step 1: Prepare and Sanitize

Wash your hands thoroughly. Sanitize all surfaces. Wash all growing supplies (trays, measuring spoons, measuring cups) with hot soapy water and dry. Sanitize next. This is especially important if you are planting and growing in your kitchen. Kitchens tend to have various pathogens lurking about (it’s gross but you definitely do not want to pick up any pathogens and start growing them along with your microgreens)

Cup of red garnet amaranth microgreens seeds
Cup of Red Garnet Amaranth Seeds

Step 2: Measure Seeds

Measure out 1/2 teaspoon of amaranth microgreens seeds. *seed measurements based on growing in an 8oz deli-style tub. For bigger trays, adjust the amount of seed to ensure even seed coverage with no seeds on top of one another but most of the soil is covered with seeds.

Amaranth seeds are small and spherical, and can easily roll around.

Step 3: Sanitize Your Seeds

It is best practice to sanitize your microgreens seeds, especially  If you or anyone who will eat your microgreens has a weakened immune system. If you buy from a reputable microgreen seed company, are growing in soil (i.e. not sprouting), using potable water, and sanitizing your tools and surfaces, the associated risk is much lower. I have not heard of any illnesses or outbreaks from microgreens, though several larger companies have issued recalls.

It is important to understand that when you grow microgreens at home, you have control over many of the potential sources of contamination. By buying from reputable seed companies, using clean water, using a growing medium without animal-based manures, and using clean tools, you are ensuring your microgreen grow is safe.

Personally, I do not sanitize my amaranth seeds. I am not growing for any at-risk populations, I buy from reputable seed suppliers, I encourage airflow to my microgreens, I use clean tools, I don’t use any animal manure, and I avoid growing in my kitchen (where food pathogens are often found). Please, use your own judgment and use caution.

8-ounce deli tray, coco coir, a cup with a flat bottom, and a mister

Step 4: Prepare Growing Medium

If you are using compressed coco coir, add water per the package directions to rehydrate. You can also eyeball it. Add some water, stir or massage (or wait for 15-30 minutes for the coco coir to absorb it), and repeat until the coir is moist. It is not possible to give you an exact amount of water because it depends on how much coir you will be rehydrating.

If you overwater your coco coir and have a soupy mess, simply grab a large handful and squeeze until no more water drips out.

Coco Coir in an 8oz deli container with surfact flattened
This coco coir has been evened out by firmly, yet gently, pressing a flat-bottomed cup on top.

Step 5: Fill Tray

For most microgreens, I recommend about a ½ cup of moist coco coir. However, for amaranth, which takes longer to grow, I recommend doubling the amount to 1-cup for a 8-ounce deli-style tray. Gently jiggle your tray to even out the soil distribution and use the bottom of the measuring cup to gently (but firmly) compress the soil and create an even surface for seed distribution. 

Creating a flat surface is crucial. If you have dips and valleys on the surface of your growing medium/coco coir, the seeds will roll into the nooks and crannies. The uneven distribution of seeds can lead to clumping and poor air circulation. Poor air circulation can lead to mold. So, do your best to flatten the top of the growing medium. I use the bottom of a measuring cup. If your seeds do clump up, use the tips of your (clean) fingers to spread them out before watering.

kale microgreens seeds sown

Step 6: Dampen and Sow

Mist your now-even tray of coir with water (just enough that your seeds will stick) and spread seeds evenly over the soil. They should not overlap much but can touch each other. Use the tips of your fingers, the measuring spoon, or broadcast seeds from a very small cup or bowl. This part is not an exact science. 

If the seeds get clumped up, use your fingers to spread them out. Lightly mist with water.

Amaranth microgreens just sown with topper tray
Amaranth just sown with topper tray

Step 7: Cover

Place the second tray directly on top of the seeds (the topper tray). See the image above for the tray-on-tray method. Or, place a thick piece of cardboard over your tray. Place in a warm place (no light is needed at this point). To encourage amaranth to grow tall, place them in a dark or very low-light area.

One trick is to place a topper tray over the amaranth and fill the topper tray with 1/2 cup of coco coir. The coco coir-filled tray will keep the amaranth seeds warm and in the dark.

Step 8: Mist Daily

If your tray is covered by cardboard, check on your tray twice a day. Mist lightly to ensure the seeds and soil stay damp if the seeds are drying. You do not want the seeds to totally dry out. But amaranth does not like soggy soil. Err on the side of drier than wetter. You may only need to mist every other day, depending on the environment.

*If your tray is covered by another tray sitting directly atop the seeds, you likely do not have to mist for a couple of days. Feel free to take a look, but avoid lifting the topper tray. Some seeds will stick to the topper tray and their growth will be disrupted. If it is very warm and you notice the soil is drying out, you can trickle water around the edges without lifting the upper tray.

In a few days, you will notice your seeds have begun to grow. If you have a topper tray, you may remove the topper to mist to ensure the tray stays moist. Continue to mist daily (or twice daily if it is warm) until there is ½ inch of growth.

These amaranth microgreens were exposed to light for the first few days of growth, so they are already pink. If the first couple of days are blacked out, the amaranth will be yellow.

A Note About Red Garnet Amaranth’s Vibrant Color

In the image above, the micro amaranth is only about 5 days old. You can see the leaves starting to unfold from the stem. The colors are shades of pink with a bit of yellow at the leaf tips. You might see the empty husks of the seed coat as a transparent yellow-brown color. If you have a keen eye, you might see some areas of white fuzz that are root hairs. The root hairs are quite delicate. It is tricky to see the difference between root hairs and non-root hair fuzz.

If you grow amaranth in the dark, you will not see the pink shades the microgreens are exposed to light.

Step 9: Remove Topper, Introduce Light, and Continue Watering

Once the micro amaranth is about ½ inch tall, remove the topper. In warm weather, amaranth microgreens grow fast and may need to be uncovered in just 4 days. The red garnet amaranth will look white-pinkish from lack of sun. From now on, you will water by gently pouring rather than misting. Basically, if you continue to mist, the microgreens will get wet, but the growing medium will not get fully watered. To ensure the soil gets adequate water, pour water along the edges of the tray to avoid damaging the microgreens but to get the water down to the soil where it is needed. 

Move the tray to a place with bright light and good airflow. This can be a sunny window, a patio, or under a lamp. Because amaranth is such a finicky microgreen, avoid placing your microgreens in direct sunlight. You will need to check on the tray frequently to ensure it doesn’t dry out. Again, your soil must be moist, not wet. It is tempting to water more in hot weather or in direct sunlight, but overwatering is still an issue. You will need to water more often rather than using more water. Expect to check your microgreens at least three times a day if growing outdoors in very warm weather. (or just grow indoors).

Amaranth roots are thin and wispy, unlike most other microgreens that have more vigorous and dense roots.
Closeup of red garnet amaranth that are not quite ready for harvest.
Red Garnet Amaranth not ready for harvest, but growing taller

Step 10: Harvest

When the Amaranth Microgreens are at least two inches tall, (tall enough to easily cut with a knife or scissors) they are ready to harvest.  If they are outdoors, bring them indoors. There is no more need for a bright window.

Harvest as much as you want to eat at a time, you do not need to harvest the whole tray all at once. Continue to water to keep the soil moist. The microgreens should remain fresh for at least two weeks. (if you want to keep them in a bright window, they will continue to grow quickly. You will need to eat them faster). 

Micro Amaranth
Ready to harvest micro amaranth

After you have cut all your microgreens, discard the soil and start over. Your microgreens will not re-grow. If you see white fuzz growing on your microgreens, that fuzz might be root hairs (totally normal). Read my post about white stuff growing on microgreens here.

Growing More Than One Tray?

If you are growing more than one tray of microgreens, you can stack them on top of one another at this stage. I recommend stacking them no more than 3 high. It may seem heavy for the bottom tray, but rest assured, those microgreens are pretty strong. Together their growth will lift up the trays on top.

I find the tray with more weight (the bottom tray) tends to grow faster than the topper tray at first. Once they are separated and exposed to light, the upper tray usually catches up in growth. You can see the bottom tray has more roots showing. You can also see more root hairs.

Two trays of micro amaranth one on top of the other
Grow multiple trays and stack them up until they need light

A Note About Glass And Growing Microgreens 

I do not use glass or Pyrex to grow microgreens. Glass is no doubt “cleaner” than growing in plastic, but when you farm for others, glass is a major no-no. Glass shattering in someone’s food supply is very bad. Glass is not allowed anywhere in commercial farming–not even glass light bulbs. Seriously, the Food Safety Modernization Act (FSMA) does not allow it.

Obviously, when you are growing for your own consumption, the fear of errant glass ending up in the food supply is not a big concern. But, keep in mind that water is involved in growing microgreens. You will also be inspecting your grow, lifting, spraying, and moving them around. Consider whether glass is the best option for you.

A Note About Overwatering

It is very possible to overwater your microgreens and drown them. The goal is for moist soil (in the case of amaranth, just moist, not wet-moist), not waterlogged. If you overwater at the early stages, remove all toppers to try to dry them out before any damage is done. If you overwater at the later stages, try gently tipping your tray on its side and allowing the excess water to drain out. You can gently squeeze the tray to encourage more water to drain out. 

If it is not possible to tip or dry out the tray, you can always try to poke a few holes in the bottom of the tray to drain out the excess water.  

A Note About Waiting Too Long To Remove the Topper

Yes, micro amaranth is an intermediate microgreen to grow. But don’t let it deter you. In the image below, I delayed in removing the topper tray. You can see the microgreens on the outside were able to grow up, unencumbered by the topper. They grew tall and straight. The middle of the tray is still bleached white because they did not get exposed to sun (I had another tray of amaranth on top). The tray in this picture is still healthy and, after a few days exposed to light, all the stems turned bright red and began to straighten out.

Image of red garnet amaranth seeds in which the middle microgreens are still whiteish while the outter microgreens are deep red.
This is what happens when you fail to remove the topper tray. Not to worry, the middle microgreens will turn red soon.

But the same thing happened again, but this time the amaranth microgreens did not survive. In the next picture, the same thing happened, but on this occasion, I overwatered the tray. So the microgreens had to deal with two major stressors- 1) the topper on too long, and 2) too much water. You can see the brownish funk. These microgreens were goners. Straight to the compost.

What happens to micro amaranth when the topper tray is on too long and it is overwatered
What happens to micro amaranth when the topper tray is on too long and it is overwatered

Growing in Colder Conditions

If you are growing during the cooler months (under 60F/15.5C degrees) and your grow zone (where you grow your microgreens) temperatures are below 60 degrees, a seed heating mat will be helpful.

You can grow amaranth microgreens without a seed heating mat, but they will take longer to grow. During the extra growing time, your crop is more at risk of mold. A seed heating mat like this one will speed up your grow. But really, it’s better to avoid growing amaranth in cold weather.


Other Microgreens Varieties

Microgreens 101: Learn All About Basil Microgreens

Learn All About Sunflower Shoots—Yes, They Are Microgreens!

All About Mustard Microgreens (Intense Mustardy Flavor)

All Your Questions Answered About Radish Microgreens

Why We Should All Eat Broccoli Microgreens

Learn All About Arugula Microgreens

Microgreens Care

3 Ways to Wash Microgreens And Avoid Mushy Microgreens

Growing Microgreens: Should You Grow Them in Your Garden?

White Fuzz on Microgreens: Is It Microgreens Mold?

Growing Microgreens: Should You Grow Them in Your Garden?

Microgreens Care: 2 Reasons You Have Gnats In Your Microgreens

Microgreens vs Sprouts: Are They The Same?

Are You Using Peat Moss To Grow Microgreens? Read This Now

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Quantum Microrgeens is your guide to living well inside & out. Get clean(ish) recipes, living tips and everything microgreens. We're Melissa & Kelly, two sisters living in California and Connecticut.

Quantum Microrgeens is your guide to living well inside & out. Get clean(ish) recipes, living tips and everything microgreens. We're Melissa & Kelly, two sisters living in California and Connecticut.

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